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PDBsum entry 2cdc
Go to PDB code:
Ligand/metal interactions
PDB id
2cdc
4 instances of ligand highlighted
XYS
Ligands
NAP
×4
NAP 1367(A)
XYS-XYP
×2
XYS 1368(A) to XYP 1369(A)
XYS
×4
XYS 1370(A)
EDO
×3
EDO 1367(B)
EDO 1367(C)
EDO 1367(D)
XYP
×2
XYP 1369(B)
XYP 1369(C)
Metals
_ZN
×8
ZN 1372(A)
ZN 1371(A)
Ligand
XYS
-
Alpha-D-Xylopyranose
[Alpha-D-Xylose; d-Xylose; xylose; xylopyranose]
Formula:
C
5
H
10
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
XYP 1369(A)
10
-
-
-
-
-
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
Residues with less than 7 heavy atoms are not validated.
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3D Viewers:
LIGPLOT
of interactions involving ligand XYS
List of
interactions
XYS 1370(A)
also representing 3 other equivalent ligands:
XYS 1370(B)
XYS 1370(C)
XYS 1371(D)
_ZN
×8
