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PDBsum entry 2cdc
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Tunnel analysis for: 2cdc calculated with  MOLE 2.0
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PDB id
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2cdc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.38 |
1.43 |
49.4 |
-1.68 |
-0.46 |
21.9 |
73 |
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7 |
3 |
2 |
3 |
2 |
1 |
0 |
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EDO 1367 B XYS 1370 B
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2 |
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1.39 |
1.44 |
53.4 |
-1.90 |
-0.55 |
22.9 |
78 |
8 |
4 |
4 |
3 |
1 |
0 |
0 |
XYS 1371 D
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3 |
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1.38 |
1.44 |
56.6 |
-1.88 |
-0.47 |
23.2 |
73 |
9 |
4 |
2 |
3 |
2 |
1 |
0 |
XYS 1370 C
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4 |
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1.38 |
1.43 |
56.7 |
-1.99 |
-0.59 |
24.9 |
79 |
7 |
4 |
4 |
3 |
1 |
0 |
0 |
XYS 1370 C
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5 |
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1.39 |
1.44 |
57.5 |
-1.91 |
-0.49 |
23.5 |
73 |
10 |
4 |
2 |
3 |
2 |
2 |
0 |
EDO 1367 D XYS 1371 D
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6 |
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1.38 |
1.44 |
61.4 |
-1.92 |
-0.48 |
23.3 |
71 |
8 |
4 |
2 |
5 |
3 |
1 |
0 |
XYS 1370 A
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7 |
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1.38 |
1.44 |
64.6 |
-1.99 |
-0.48 |
24.2 |
72 |
8 |
6 |
3 |
5 |
3 |
1 |
1 |
XYS 1370 A
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8 |
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1.08 |
1.45 |
38.9 |
1.36 |
0.50 |
5.3 |
73 |
2 |
0 |
0 |
13 |
1 |
2 |
1 |
NAP 1368 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program