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PDBsum entry 1g29
Go to PDB code:
Ligand/metal interactions
PDB id
1g29
2 instances of ligand highlighted
POP
Ligands
NH4
×3
NH4 373(1)
NH4 374(2)
POP
×2
POP 501(1)
DIO
×3
DIO 830(1)
DIO 831(1)
DIO 832(1)
Metals
_CL
×10
CL 374(1)
CL 375(1)
CL 381(1)
CL 391(1)
CL 378(2)
CL 381(2)
CL 395(2)
CL 396(2)
_NA
×28
NA 376(1)
NA 377(1)
NA 379(1)
NA 380(1)
NA 382(1)
NA 383(1)
NA 385(1)
NA 386(1)
NA 387(1)
NA 388(1)
NA 389(1)
NA 390(1)
NA 394(1)
NA 414(1)
NA 422(1)
NA 380(2)
NA 384(2)
NA 397(2)
_MG
×11
MG 378(1)
MG 384(1)
MG 392(1)
MG 393(1)
MG 375(2)
MG 385(2)
MG 386(2)
MG 389(2)
MG 393(2)
Ligand
POP
-
Pyrophosphate 2-
Formula:
H
2
O
7
P
2
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
POP 501(1)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
POP 501(1)
O3: O1
|
O1: O2
|
O2: O3
3
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's product phosphate with similarity 55.56%
LIGPLOT
of interactions involving ligand POP
List of
interactions
POP 501(1)
(also representing equivalent ligand POP 500(2) )
_CL
×10
_MG
×11
