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PDBsum entry 1g29

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1g29 calculated with MOLE 2.0 PDB id
1g29
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 2.45 27.4 -1.43 -0.48 13.4 83 2 1 5 2 2 2 0  
2 1.29 2.44 33.5 -1.94 -0.05 25.4 80 8 2 1 3 2 2 0  MG 389 2
3 1.29 2.43 34.2 -0.64 -0.06 13.1 83 5 1 1 4 1 2 0  MG 389 2 POP 500 2
4 2.02 2.11 34.6 -1.88 -0.40 16.4 84 5 1 6 1 3 0 0  
5 1.94 3.33 44.7 -1.00 -0.25 11.6 83 6 1 6 4 4 0 0  POP 500 2
6 1.86 2.03 47.0 -0.47 -0.07 15.2 73 5 2 2 7 3 0 0  NA 386 1
7 1.21 1.47 48.9 -1.67 0.04 23.9 74 9 2 0 4 4 0 0  NA 391 2
8 1.19 1.47 49.7 -1.07 0.08 19.4 78 9 1 0 7 4 0 0  POP 500 2
9 1.20 1.46 50.9 -0.97 -0.22 11.9 80 3 2 6 5 4 0 0  NA 391 2
10 1.20 1.47 55.7 -1.13 -0.02 20.7 74 6 3 1 6 5 2 0  NA 391 2
11 1.89 2.02 56.5 -0.30 0.13 14.3 75 8 1 2 10 3 0 0  NA 386 1 POP 500 2
12 1.87 1.94 63.2 -1.45 -0.66 12.3 83 4 3 8 4 2 0 0  NA 390 2

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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