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PDBsum entry 1vsw

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protein ligands Protein-protein interface(s) links
Transferase PDB id
1vsw

 

 

 

 

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Contents
Protein chains
(+ 24 more) 152 a.a. *
Ligands
PO4 ×30
* Residue conservation analysis
Obsolete entry
PDB id:
1vsw
Name: Transferase
Title: Crystal structure of lumazine synthase from bacillus anthracis
Structure: 6,7-dimethyl-8-ribityllumazine synthase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z, 1, 2, 3, 4. Synonym: riboflavin synthase beta chain, lumazine synthase. Engineered: yes
Source: Bacillus anthracis. Organism_taxid: 1392. Gene: ribh. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
3.50Å     R-factor:   0.236     R-free:   0.286
Authors: E.Morgunova,B.Illarionov,S.Saller,A.Popov,T.Sambaiah,A.Bacher, M.Cushman,M.Fischer,R.Ladenstein
Key ref: E.Morgunova et al. (2010). Structural study and thermodynamic characterization of inhibitor binding to lumazine synthase from Bacillus anthracis. Acta Crystallogr D Biol Crystallogr, 66, 1001-1011. PubMed id: 20823551
Date:
16-Sep-09     Release date:   10-Nov-10    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q81MB5  (RISB_BACAN) -  6,7-dimethyl-8-ribityllumazine synthase from Bacillus anthracis
Seq:
Struc:
153 a.a.
152 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.5.1.78  - 6,7-dimethyl-8-ribityllumazine synthase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: (2S)-2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + phosphate + 2 H2O + H+
(2S)-2-hydroxy-3-oxobutyl phosphate
+ 5-amino-6-(D-ribitylamino)uracil
= 6,7-dimethyl-8-(1-D-ribityl)lumazine
+ phosphate
+ 2 × H2O
Bound ligand (Het Group name = PO4)
corresponds exactly
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
Acta Crystallogr D Biol Crystallogr 66:1001-1011 (2010)
PubMed id: 20823551  
 
 
Structural study and thermodynamic characterization of inhibitor binding to lumazine synthase from Bacillus anthracis.
E.Morgunova, B.Illarionov, S.Saller, A.Popov, T.Sambaiah, A.Bacher, M.Cushman, M.Fischer, R.Ladenstein.
 
  ABSTRACT  
 
No abstract given.

 

 

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