PDBsum entry 1vsw Go to PDB code:  Pore analysis for: 1vsw calculated with MOLE 2.0 PDB id 1vsw Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.92 3.20 28.6 -1.89 -0.36 23.1 75 3 4 2 0 3 0 0   2 1.82 2.52 34.9 -1.58 -0.16 25.1 75 3 5 1 2 3 0 0  PO4 1001 4 3 1.83 3.15 37.0 -2.11 -0.26 24.2 72 3 6 2 0 5 0 0   4 1.72 3.16 40.8 -2.22 -0.28 26.1 72 3 7 3 0 6 0 0   5 1.32 1.48 45.2 -1.53 -0.35 17.7 79 6 5 5 1 4 0 0   6 1.87 4.39 46.8 -2.07 -0.56 23.2 80 6 4 4 1 3 0 0   7 1.32 1.48 46.8 -1.55 -0.40 21.3 83 8 5 4 4 2 0 0  PO4 1001 D 8 1.75 2.37 61.1 -0.66 0.07 21.2 75 5 6 1 8 3 0 0  PO4 1001 E 9 1.75 2.35 66.1 -1.39 -0.07 22.7 72 5 8 2 6 6 0 0   10 1.82 3.14 69.6 -2.11 -0.31 24.7 77 5 7 4 0 6 0 0   11 1.84 3.15 74.4 -1.99 -0.47 28.2 80 5 7 3 4 3 0 0  PO4 1001 G 12 1.83 3.15 78.1 -1.78 -0.32 26.6 81 9 8 3 6 4 1 0  PO4 1001 V 13 1.75 2.40 85.4 -1.50 -0.20 22.2 77 7 10 5 5 6 0 0   14 1.14 1.19 104.1 -0.91 -0.23 17.0 76 9 9 10 8 10 2 0   15 1.20 2.07 154.3 -1.10 -0.23 13.6 79 10 6 10 15 6 2 0  PO4 1001 P 16 1.74 2.32 153.9 -1.35 -0.30 25.7 79 11 14 3 14 5 0 0  PO4 1001 E PO4 1001 S 17 1.20 1.31 158.7 -1.30 -0.24 15.5 77 11 8 10 13 8 3 0   18 1.22 1.38 167.6 -1.27 -0.25 14.2 76 9 8 11 13 10 3 0   19 1.17 1.23 175.0 -1.23 -0.29 15.6 78 11 9 12 16 8 2 0   20 1.91 3.17 203.5 -1.79 -0.53 27.1 82 11 17 7 10 5 0 0  PO4 1001 S 21 1.21 1.91 257.9 -1.23 -0.41 22.0 80 17 17 13 16 8 3 0  PO4 1001 E PO4 1001 O PO4 1001 S 22 1.19 1.27 297.5 -1.13 -0.27 13.1 77 17 9 20 26 14 5 0   23 1.19 1.20 297.0 -1.10 -0.26 13.1 78 17 9 20 27 14 5 0   24 1.19 1.26 373.0 -1.50 -0.46 20.2 82 21 25 18 23 8 2 0  PO4 1001 E PO4 1001 Y 25 1.23 1.25 380.9 -1.49 -0.43 20.3 82 21 27 18 26 8 2 0  PO4 1001 F PO4 1001 Y 26 1.20 2.06 419.2 -1.40 -0.37 18.1 80 26 18 25 30 12 4 0  PO4 1001 E PO4 1001 T 27 1.20 1.23 427.8 -1.38 -0.36 18.0 80 26 20 24 32 12 4 0  PO4 1001 E PO4 1001 U 28 1.19 1.18 427.1 -1.35 -0.35 17.6 80 26 20 24 33 12 4 0  PO4 1001 F PO4 1001 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.