- Course overview
- Search within this course
- What is RNAcentral?
- Exploring RNAcentral
- Using RNAcentral text search to explore ncRNA sequences
- Using RNAcentral sequence search
- Submitting data to RNAcentral
- Exploring expert databases
- Summary
- Test your knowledge
- Your feedback
- References
- Get help and support on RNAcentral
References
- The RNAcentral Consortium. (2019). RNAcentral: a hub of information for non-coding RNA sequences. Nucleic Acids Research, 47(D1), D221–D229
- Lekka E. & Hall J. (2018). Noncoding RNAs in disease. FEBS Lett. 2018 Sep; 592(17): 2884–2900
- The RNAcentral Consortium. (2017). RNAcentral: a comprehensive database of non-coding RNA sequences. Nucleic Acids Research, 45(D1), D128–D134
- Ontiveros-Palacios, N. et al. (2025). Rfam 15: RNA families database in 2025 Nucleic Acids Research. 53, D1, D258–D267
- Huntley, R. P. et al. (2014). The GOA database: gene ontology annotation updates for 2015. Nucleic Acids Research, 43(D1), D1057–D1063
- Pignatelli, M. et al. (2016). ncRNA orthologies in the vertebrate lineage. Database. 2016, bav127
- Machnicka, M. A. et al. (2013). MODOMICS: a database of RNA modification pathways–2013 update. Nucleic Acids Research, 41(Database issue), D262–D267
- O’Cathail, C. et al. (2025). The European Nucleotide Archive in 2024. Nucleic Acids Research, 53(D1), D49–D55
- Wheeler, T. J., & Eddy, S. R. (2013). nhmmer: DNA homology search with profile HMMs. Bioinformatics , 29(19), 2487–2489
- RNA-KG website https://rna-kg.biodata.di.unimi.it/index.html
- Green, A. F. et al. (2025). RNAcentral in 2026: Genes and literature integration. bioRxiv
Further references
The RNAcentral Consortium. (2025). RNAcentral in 2026: Genes and literature integration. bioRxiv
The RNAcentral Consortium. (2020). RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. Nucleic Acids Research, DOI: 10.1093/nar/gkaa921
Sweeney B. A. et al. (2020). Exploring Non‐Coding RNAs in RNAcentral. Current Protocols in Bioinformatics. https://doi.org/10.1002/cpbi.104