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Getting data from Reactome

  • All Reactome pathways can be downloaded from the Reactome website in several formats. For reference use, Rich Text Format (Word compatible) and PDF formats are available. For computational re-use, SBML level 2.3 and BioPAX level 2 and 3 formats are available
  • Individual pathways can be downloaded using links available at the bottom of the pathway browser
  • Analysis results can be downloaded as CSV, PDF or JSON formats
  • Reactome hosts an icon library that contains over 1500 artistically designed biological molecules for use in publications and presentations (available in SVG, PNG and EMF formats)
  • Human protein-protein interactions are available in PSI-MITAB format
  • Pathway diagrams are available in PDF and PNG formats
  • The Reactome MySQL database, schema, code and web interface can be downloaded for local implementation and development