- Course overview
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- What is genetic variation?
- Exploring publicly available data
- European Variation Archive
- Browsing genomes with Ensembl
- Ensembl Variant Effect Predictor
- Investigating variation with UniProt
- European Genome-Phenome Archive
- Investigating genotype-phenotype data using the GWAS Catalog
- Exploring somatic mutations in cancer
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Investigating genotype-phenotype data using the GWAS Catalog
The NHGRI-EBI GWAS Catalog is a publicly available resource of Genome Wide Association Studies (GWAS) and their results. The Catalog contains a lot of data and includes useful visualisations of the variant-trait associations, which are mapped onto their chromosomal positions on the human genome.
This online tutorial, which will take about 1 hour, provides an introduction of how to browse SNP-trait associations using the NHGRI-EBI GWAS Catalog.