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Introduction to metabolomics analysis

  • Overview
  • Search
  • Course content
  • Introduction to Metabolomics
  • Experimental design and quality control in metabolomics
  • Introduction to LC-MS platforms, data types and quality assessment of data
  • Galaxy in Metabolomics
  • Methods and resources
    • Statistical analysis (Data modelling)
    • Metabolite Identification
    • MetaboLights data and workflows: lecture and tutorial
    • Pathways with Reactome
    • Spatial single-cell metabolomics
  • Other Metabolomics materials
    • LC/GC-MS: Data acquisition and Data processing (MS1 and MSn)
    • Case study: Metabolon
    • WikiPathways
  • Trainer biographies
  • Further learning
  • Your feedback

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All materials are free cultural works licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) license, except where further licensing details are provided.

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Spatial single-cell metabolomics

Trainer: Theodore Alexandrov

Overview: This lecture explains how spatial single-cell metabolomics can reveal metabolic cell states.

Learning outcomes

By the end of this lecture you will be able to:

  • Describe spatial single-cell metabolomics
  • Identify importance of spatial metabolomics in studying tumour microenvironment and spatial roles of immune system

Materials:

  • Link to presentation slides
  • page navigation-left-circle-1_1 Pathways with Reactome
  • pageOther Metabolomics materials navigation-right-circle-1_1