Pangenomics
Trainers: Erik Garrison
Overview: This keynote presentation provides an overview of the Human Pangenome Consortium.
Learning outcomes:
By the end of this session you will be able to:
- Describe the aims of pangenome projects
Materials:
- Overview
- Search
- Course content
- Introduction to BASH
- NGS, raw read pre-processing, quality control, and read mapping
- Alignment and Genome assembly
- Variant calling
- Variant annotation and effect prediction
- Long-read sequencing
- Pangenomics
- Parallel processing and Pipeline building
- Version control and Responsible Data management
- Technical helpsheet
- Trainer biographies
- Further learning
- Your feedback
All materials are free cultural works licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) license, except where further licensing details are provided.