Interactions & Pathways - Reactome

Date:

  Tuesday 3 November 2015

Venue: 

University of Cambridge - Downing Site, Cambridge,  CB2 3AR, United Kingdom

Participation: 

First come, first served

Contact: 

Zaria Byer

Registration fee: 

£0

Registration closed

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Course Overview

This workshop will give an introduction to the Reactome pathway database website and analysis tools, using short presentations and practical hands-on exercises. The session will also explain where to learn more, get help, and how to become involved in adding more pathway information to Reactome.

Audience

  • This workshop is aimed at researchers who want to learn about pathways or identify pathways relevant to a set of molecules
  • Graduate students, Postdocs and Staff members from the University of Cambridge, Affiliated Institutions and other external Institutions or individuals
  • Further details regarding eligibility criteria are available here
  • Further details regarding the charging policy are available here

Learning outcomes

After this course you should be able to:

  • Navigate the Reactome Pathway browser, search pathways and understand pathway diagrams
  • Find proteins or compounds represented in Reactome
  • Extend Reactome pathways with protein-protein or protein-compound interactions from relevant databases or with your own interactions data
  • Map your own lists of genes, proteins, or compounds to Reactome pathways and identifying the pathways that are over-represented
  • Visualise pathway expression levels using your own microarray or protein dataset