spacer
spacer

PDBsum entry 9u4w

Go to PDB code: 
Top Page protein Protein-protein interface(s) links
Membrane protein PDB id
9u4w
Contents
Protein chains
219 a.a.
338 a.a.
11 a.a.
57 a.a.
271 a.a.
232 a.a.
procheck   Generate full PROCHECK analyses

PROCHECK summary for 9u4w

Ramachandran plot

PROCHECK statistics

1. Ramachandran Plot statistics


                                         No. of
                                        residues     %-tage
                                         ------      ------
Most favoured regions      [A,B,L]          856       86.0%*  
Additional allowed regions [a,b,l,p]        136       13.7%          
Generously allowed regions [~a,~b,~l,~p]      2        0.2%          
Disallowed regions         [XX]               1        0.1%*  
                                           ----      ------
Non-glycine and non-proline residues        995      100.0%

End-residues (excl. Gly and Pro)             22

Glycine residues                             71
Proline residues                             39
                                           ----
Total number of residues                   1127


Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good quality model would be expected to have over 90% in the most favoured regions [A,B,L].


2. G-Factors

                                                Average
Parameter                            Score       Score
---------                            -----       -----
Dihedral angles:-
     Phi-psi distribution            -0.19      
     Chi1-chi2 distribution          -0.36      
     Chi1 only                       -0.01      
     Chi3 & chi4                      0.50      
     Omega                           -0.17      
                                                  -0.14      
                                                  =====
Main-chain covalent forces:-
     Main-chain bond lengths          0.67      
     Main-chain bond angles           0.48      
                                                   0.56      
                                                  =====

     OVERALL AVERAGE                               0.14      
                                                  =====

G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.

Values below -0.5*  - unusual
Values below -1.0** - highly unusual
Important note: The main-chain bond-lengths and bond angles are compared with the Engh & Huber (1991) ideal values derived from small-molecule data. Therefore, structures refined using different restraints may show apparently large deviations from normality.

 

spacer

spacer