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PDBsum entry 9pda
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Pore analysis for: 9pda calculated with  MOLE 2.0
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PDB id
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9pda
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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3 pores,
coloured by radius
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3 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.36 |
2.87 |
29.4 |
-0.61 |
0.13 |
9.3 |
81 |
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2 |
1 |
3 |
5 |
3 |
0 |
0 |
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PEG 311 C PG4 324 C PG5 303 D BEN 306 D
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2 |
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2.36 |
2.66 |
36.3 |
-0.58 |
0.06 |
8.1 |
81 |
3 |
0 |
4 |
5 |
3 |
0 |
0 |
PEG 311 C PG4 324 C PG5 303 D PG5 304 D BEN 306 D
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3 |
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2.31 |
2.77 |
44.5 |
-0.77 |
-0.11 |
8.4 |
85 |
3 |
0 |
6 |
6 |
3 |
1 |
0 |
PEG 311 C PG4 324 C PG5 303 D BEN 306 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program