PDBsum entry 9ima Go to PDB code:  Tunnel analysis for: 9ima calculated with MOLE 2.0 PDB id 9ima Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.26 20.2 -0.91 -0.74 2.2 105 0 0 7 2 0 0 0   2 1.16 1.16 15.2 -0.40 0.40 10.6 82 2 0 5 3 1 0 0   3 1.25 3.71 15.8 1.63 0.62 2.4 76 0 1 2 5 2 1 0   4 1.23 3.71 15.9 1.68 0.70 2.7 77 0 1 2 5 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.