PDBsum entry 9ii3 Go to PDB code:  Tunnel analysis for: 9ii3 calculated with MOLE 2.0 PDB id 9ii3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.09 2.17 37.9 1.77 0.44 2.4 91 1 0 1 11 1 0 0   2 1.47 1.49 16.2 1.97 0.69 3.9 85 0 1 0 5 2 0 0   3 1.35 1.42 17.5 2.08 0.85 3.8 85 0 1 0 5 2 0 0   4 1.30 1.32 15.4 -1.83 -0.29 23.4 75 2 2 2 1 1 1 0   5 1.43 1.75 18.2 1.09 0.15 3.8 86 0 2 3 6 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.