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PDBsum entry 9f9v

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 9f9v calculated with MOLE 2.0 PDB id
9f9v
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.59 22.1 -1.03 -0.35 12.4 73 2 1 1 3 3 0 0  
2 1.16 1.31 29.0 -1.01 -0.36 19.8 84 3 1 1 4 1 0 0  SO4 403 B
3 1.38 1.58 15.1 -0.80 -0.51 10.3 75 2 2 0 2 2 0 0  
4 1.37 1.62 15.6 -0.65 -0.42 9.3 71 2 1 0 2 3 0 0  
5 1.19 1.68 15.3 -0.64 -0.49 13.9 80 1 2 2 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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