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PDBsum entry 8zbj
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Tunnel analysis for: 8zbj calculated with  MOLE 2.0
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PDB id
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8zbj
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.04 |
2.91 |
19.7 |
2.50 |
0.85 |
0.9 |
92 |
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0 |
0 |
1 |
8 |
1 |
0 |
0 |
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2 |
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1.25 |
1.74 |
21.6 |
1.68 |
0.47 |
1.4 |
85 |
0 |
0 |
1 |
5 |
3 |
0 |
0 |
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3 |
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1.09 |
2.18 |
21.7 |
2.83 |
1.02 |
5.1 |
80 |
1 |
1 |
0 |
8 |
2 |
0 |
0 |
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4 |
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1.26 |
1.81 |
21.8 |
1.77 |
0.58 |
5.5 |
75 |
1 |
1 |
0 |
5 |
3 |
0 |
0 |
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5 |
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1.11 |
2.87 |
24.2 |
3.30 |
1.07 |
0.6 |
81 |
0 |
0 |
0 |
8 |
3 |
0 |
0 |
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6 |
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1.04 |
2.90 |
28.8 |
2.65 |
0.77 |
1.0 |
86 |
0 |
0 |
2 |
9 |
1 |
0 |
1 |
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7 |
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1.39 |
1.56 |
15.9 |
-0.28 |
-0.17 |
16.5 |
83 |
1 |
2 |
0 |
5 |
0 |
1 |
0 |
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8 |
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1.32 |
1.49 |
18.2 |
1.26 |
0.19 |
6.5 |
85 |
0 |
1 |
0 |
5 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program