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PDBsum entry 8yh5
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Pore analysis for: 8yh5 calculated with  MOLE 2.0
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PDB id
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8yh5
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.16 |
1.36 |
32.3 |
0.22 |
-0.27 |
8.6 |
87 |
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2 |
2 |
1 |
7 |
0 |
0 |
0 |
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2 |
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2.15 |
2.34 |
32.5 |
-0.68 |
-0.43 |
10.9 |
81 |
5 |
1 |
3 |
3 |
2 |
0 |
0 |
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3 |
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2.19 |
2.19 |
37.3 |
-1.78 |
-0.66 |
22.6 |
87 |
4 |
4 |
2 |
2 |
1 |
0 |
0 |
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4 |
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2.19 |
2.19 |
39.8 |
-1.37 |
-0.59 |
16.3 |
85 |
4 |
3 |
4 |
2 |
2 |
0 |
0 |
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5 |
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1.84 |
3.81 |
42.1 |
-0.92 |
-0.32 |
14.7 |
76 |
5 |
1 |
3 |
3 |
3 |
2 |
3 |
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6 |
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1.25 |
1.45 |
43.4 |
-1.18 |
-0.20 |
10.6 |
81 |
3 |
2 |
3 |
2 |
2 |
3 |
0 |
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7 |
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1.47 |
1.68 |
49.4 |
-0.17 |
-0.07 |
15.6 |
79 |
4 |
3 |
3 |
8 |
2 |
0 |
0 |
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8 |
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1.17 |
1.36 |
58.8 |
1.10 |
0.25 |
10.1 |
82 |
2 |
3 |
1 |
14 |
0 |
0 |
0 |
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9 |
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1.19 |
1.39 |
90.3 |
0.03 |
0.05 |
16.3 |
83 |
6 |
4 |
2 |
14 |
0 |
0 |
0 |
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10 |
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1.06 |
2.30 |
122.8 |
-0.38 |
-0.03 |
14.7 |
78 |
8 |
5 |
3 |
10 |
5 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program