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PDBsum entry 8y72
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Pore analysis for: 8y72 calculated with  MOLE 2.0
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PDB id
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8y72
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.64 |
3.82 |
31.5 |
-2.34 |
-0.55 |
28.6 |
83 |
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7 |
3 |
2 |
2 |
0 |
1 |
0 |
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2 |
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1.35 |
1.41 |
35.4 |
-1.07 |
-0.22 |
20.1 |
80 |
5 |
2 |
0 |
5 |
2 |
1 |
0 |
VV9 403 R
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3 |
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2.79 |
2.93 |
37.8 |
-1.74 |
-0.62 |
22.4 |
88 |
7 |
4 |
3 |
3 |
0 |
0 |
0 |
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4 |
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2.80 |
2.93 |
40.0 |
-1.03 |
-0.36 |
18.8 |
81 |
8 |
2 |
1 |
4 |
0 |
1 |
0 |
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5 |
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1.35 |
1.40 |
41.0 |
-1.65 |
-0.46 |
23.4 |
84 |
5 |
4 |
2 |
5 |
2 |
1 |
0 |
VV9 403 R
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6 |
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2.36 |
2.36 |
44.3 |
-2.91 |
-0.49 |
35.3 |
87 |
7 |
1 |
2 |
1 |
0 |
0 |
0 |
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7 |
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1.28 |
1.49 |
45.1 |
-1.39 |
-0.22 |
21.3 |
75 |
5 |
4 |
2 |
2 |
3 |
1 |
1 |
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8 |
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1.37 |
1.40 |
48.9 |
-0.71 |
-0.33 |
16.7 |
82 |
6 |
3 |
1 |
7 |
2 |
1 |
0 |
VV9 403 R
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9 |
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1.77 |
4.15 |
41.0 |
-1.44 |
-0.46 |
17.9 |
84 |
7 |
3 |
5 |
2 |
1 |
2 |
2 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program