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PDBsum entry 8y72
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Tunnel analysis for: 8y72 calculated with  MOLE 2.0
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PDB id
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8y72
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.57 |
1.80 |
20.3 |
-1.62 |
-0.20 |
14.1 |
85 |
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2 |
2 |
3 |
1 |
2 |
0 |
0 |
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2 |
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1.53 |
3.87 |
23.4 |
-1.75 |
-0.48 |
17.0 |
85 |
4 |
2 |
3 |
2 |
2 |
0 |
0 |
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3 |
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1.49 |
1.75 |
23.5 |
-1.27 |
-0.33 |
12.8 |
82 |
3 |
2 |
1 |
3 |
2 |
0 |
0 |
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4 |
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1.44 |
3.62 |
26.2 |
-1.71 |
-0.40 |
13.8 |
80 |
3 |
2 |
2 |
1 |
3 |
1 |
0 |
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5 |
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1.71 |
3.51 |
25.4 |
-2.08 |
-0.29 |
25.3 |
85 |
5 |
2 |
2 |
3 |
2 |
0 |
0 |
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6 |
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1.75 |
1.83 |
31.4 |
-0.80 |
-0.44 |
13.5 |
87 |
2 |
1 |
5 |
4 |
1 |
1 |
2 |
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7 |
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1.52 |
1.62 |
18.2 |
1.07 |
0.46 |
10.7 |
79 |
3 |
0 |
0 |
6 |
1 |
0 |
0 |
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8 |
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1.46 |
1.76 |
17.4 |
2.62 |
0.78 |
0.6 |
83 |
0 |
0 |
1 |
3 |
2 |
0 |
0 |
CLR 402 R
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program