PDBsum entry 8y01 Go to PDB code:  Pore analysis for: 8y01 calculated with MOLE 2.0 PDB id 8y01 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.00 2.00 72.7 -1.17 -0.15 22.0 79 8 2 2 6 3 1 0   2 1.58 2.77 177.5 -0.66 0.17 17.9 82 9 5 5 16 6 0 0   3 1.71 3.10 238.1 -0.80 0.08 16.1 82 12 7 10 18 10 1 0   4 2.16 3.39 42.7 -1.29 -0.39 17.6 80 8 2 5 3 3 2 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.