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PDBsum entry 8x16

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8x16 calculated with MOLE 2.0 PDB id
8x16
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.45 34.1 -1.04 -0.31 10.9 89 3 2 6 3 3 1 0  
2 1.23 1.23 34.7 -0.80 -0.30 19.0 89 6 2 1 6 0 0 0  
3 1.36 1.55 38.8 -0.02 -0.18 12.2 93 3 1 1 7 0 0 0  
4 1.23 1.52 68.4 -1.12 -0.40 12.8 87 4 2 5 6 3 1 0  
5 1.17 2.25 139.8 0.84 0.32 10.7 77 8 5 3 23 8 0 3  Q8L 401 R
6 1.41 1.56 47.8 -1.36 -0.58 14.5 89 4 2 1 4 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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