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PDBsum entry 8x16

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 8x16 calculated with MOLE 2.0 PDB id
8x16
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.19 37.2 1.04 0.25 5.7 87 1 0 3 12 2 0 0  Q8L 401 R
2 1.17 1.20 40.2 0.67 0.21 5.7 83 1 0 5 9 4 0 0  Q8L 401 R
3 1.03 1.03 16.4 2.53 0.55 0.8 83 0 0 1 8 0 0 0  
4 1.39 1.47 17.5 1.43 0.14 1.6 80 0 0 1 7 0 0 0  
5 1.03 1.03 18.8 2.45 0.55 0.8 85 0 0 1 9 0 0 0  
6 1.41 1.49 19.9 1.42 0.15 1.6 82 0 0 1 8 0 0 0  
7 1.15 1.41 16.4 -0.72 0.18 12.3 61 1 1 0 2 2 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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