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PDBsum entry 8wc6

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8wc6 calculated with MOLE 2.0 PDB id
8wc6
Pores calculated on whole structure Pores calculated excluding ligands

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15 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.68 2.68 25.2 -0.88 -0.37 10.0 81 3 1 5 3 0 0 0  
2 2.20 3.78 62.5 -1.16 -0.36 10.3 80 4 3 7 4 2 0 1  
3 3.03 3.03 68.9 -1.20 -0.58 10.7 83 6 2 5 3 2 2 0  
4 2.18 2.36 89.6 -0.99 -0.45 10.7 86 6 2 9 4 4 0 1  
5 1.65 1.66 94.3 -1.47 -0.33 16.8 83 13 3 8 4 5 1 0  
6 2.04 4.13 95.9 -1.19 -0.56 13.4 88 8 4 12 5 1 2 3  
7 1.25 1.41 122.5 0.11 0.25 6.2 74 4 3 7 12 12 2 1  PEA 401 R
8 1.96 4.30 123.8 -1.18 -0.42 12.3 83 9 5 10 5 3 4 3  
9 1.68 1.68 135.5 -1.39 -0.42 13.6 83 14 4 9 6 4 3 0  
10 1.28 2.30 137.4 -1.47 -0.50 18.1 87 9 6 6 6 2 1 0  
11 1.72 1.72 147.2 -1.36 -0.46 16.6 85 12 6 8 5 3 1 1  
12 1.71 1.71 162.1 -1.09 -0.42 12.2 86 10 4 10 6 3 1 0  
13 1.75 2.92 163.5 -1.09 -0.39 13.5 83 11 6 11 7 5 1 0  
14 1.27 2.37 261.5 -1.35 -0.45 15.5 85 12 10 12 9 3 2 0  
15 1.31 2.23 266.2 -1.49 -0.39 16.7 83 17 13 13 13 7 3 3  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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