PDBsum entry 8vvf Go to PDB code:  Tunnel analysis for: 8vvf calculated with MOLE 2.0 PDB id 8vvf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.46 25.4 -1.44 -0.43 20.6 81 4 1 2 4 0 0 0   2 1.37 1.62 16.6 -0.74 -0.34 11.9 85 2 2 1 4 1 0 0   3 1.33 1.56 22.7 -1.37 -0.45 14.4 87 2 2 2 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.