PDBsum entry 8vvf Go to PDB code:  Pore analysis for: 8vvf calculated with MOLE 2.0 PDB id 8vvf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.45 1.47 26.1 -0.89 -0.35 14.8 80 2 3 2 1 2 0 0   2 2.16 2.51 26.5 -1.45 -0.59 16.7 88 3 3 2 3 1 0 0   3 1.14 1.31 31.0 0.42 0.06 1.9 82 0 0 1 7 4 1 0   4 1.35 1.49 31.0 0.39 0.10 2.6 85 0 1 3 8 4 0 0   5 1.82 3.08 34.9 -0.41 0.22 16.2 81 3 3 2 8 4 0 0   6 1.24 2.19 37.1 -0.01 -0.12 4.4 83 0 2 4 6 3 0 0  JDC 401 A 7 1.12 3.46 38.4 0.37 0.35 6.8 79 1 1 2 11 5 0 0  JDC 401 A 8 1.34 1.41 39.7 0.24 0.17 8.3 80 2 2 3 9 5 0 0  JDC 401 A 9 1.23 1.23 40.6 -0.11 0.20 11.4 78 3 2 2 6 4 0 2  JDC 401 A 10 1.20 2.06 41.1 0.11 0.16 7.8 86 1 2 4 10 4 0 0  JDC 401 A 11 1.11 1.77 43.1 0.33 0.14 6.2 76 1 2 3 6 4 0 2  JDC 401 A 12 1.95 4.53 47.6 -1.58 -0.44 19.6 83 6 3 4 2 2 1 2   13 1.32 1.80 49.4 2.40 0.85 0.8 84 0 0 1 14 3 0 0   14 1.22 1.22 50.0 0.31 0.15 6.0 84 1 2 5 8 4 0 2  JDC 401 A 15 1.16 1.32 39.8 -1.03 -0.61 7.9 88 1 1 2 3 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.