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PDBsum entry 8vev

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 8vev calculated with MOLE 2.0 PDB id
8vev
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.80 3.80 25.5 -1.81 -0.63 17.2 79 3 1 2 1 0 2 0  SO4 301 L
2 3.13 3.24 27.7 -1.59 -0.71 10.2 96 1 3 8 2 0 0 0  
3 3.90 4.02 41.7 -1.75 -0.68 16.3 85 4 4 5 2 1 0 0  SO4 302 L
4 2.94 3.30 43.8 -1.35 -0.61 14.6 96 2 4 7 3 0 1 0  
5 3.28 4.27 77.3 -1.64 -0.55 19.8 84 2 4 5 4 1 2 0  
6 2.24 2.48 77.7 -1.08 -0.23 13.5 74 1 5 3 5 4 4 0  SO4 301 B
7 1.79 1.82 28.9 -0.72 -0.31 12.0 76 4 0 1 4 1 1 0  SO4 302 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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