 |
PDBsum entry 8vev
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 8vev calculated with MOLE 2.0
|
PDB id
|
|
|
|
8vev
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
3 tunnels,
coloured by tunnel radius |
 |
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.22 |
1.33 |
17.9 |
-1.07 |
-0.68 |
14.8 |
84 |
 |
1 |
2 |
1 |
2 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.66 |
2.96 |
19.0 |
-1.22 |
-0.68 |
7.3 |
100 |
1 |
0 |
3 |
1 |
1 |
0 |
0 |
|
 |
3 |
 |
1.74 |
1.90 |
16.4 |
-1.63 |
-0.50 |
13.9 |
83 |
2 |
1 |
2 |
2 |
1 |
0 |
0 |
CL 305 H
|
 |
4 |
 |
1.92 |
2.19 |
16.9 |
0.77 |
0.10 |
8.7 |
83 |
1 |
0 |
1 |
4 |
1 |
0 |
0 |
SO4 302 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |