PDBsum entry 8tnh Go to PDB code:  Pore analysis for: 8tnh calculated with MOLE 2.0 PDB id 8tnh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.08 3.04 25.5 -2.72 -0.55 30.8 84 4 3 2 1 0 0 0   2 2.45 2.45 33.0 -1.58 -0.71 14.5 94 3 3 5 2 0 0 0  NAG 607 C 3 2.72 2.72 49.2 -2.40 -0.54 26.8 86 10 2 2 1 0 0 0   4 3.02 3.03 49.8 -2.34 -0.55 31.1 80 5 4 3 3 1 1 0  NAG 1 N NAG 2 N NAG 1 O NAG 2 O 5 1.99 2.40 59.4 -1.16 -0.31 20.2 83 7 3 4 5 0 0 0   6 1.71 1.85 60.5 -1.29 -0.44 15.8 80 5 2 4 3 2 1 0   7 2.46 2.47 65.4 -2.30 -0.64 23.2 90 11 3 5 2 0 0 0  NAG 607 C 8 1.73 1.89 68.6 -0.83 -0.33 14.3 80 5 3 2 7 2 2 0   9 2.52 2.46 73.4 -1.93 -0.61 20.4 90 8 5 7 3 0 0 0  NAG 607 C 10 1.97 2.43 77.4 -1.97 -0.34 27.9 81 13 2 2 5 0 1 0   11 1.16 1.43 80.4 -1.81 -0.52 23.9 82 8 5 5 3 0 1 2  NAG 1 Z NAG 2 Z BMA 3 Z MAN 4 Z 12 2.08 3.02 81.7 -3.05 -0.47 35.0 83 16 3 4 2 0 1 0   13 2.10 2.99 82.6 -2.43 -0.49 27.7 83 12 5 6 3 0 1 0   14 2.73 2.73 90.7 -1.37 -0.38 19.5 82 8 4 5 6 1 1 0   15 3.97 4.33 90.8 -2.18 -0.38 28.4 81 14 2 3 5 1 1 0   16 2.00 2.44 94.0 -1.40 -0.31 21.5 81 9 5 5 7 0 2 0   17 2.03 2.66 94.1 -1.45 -0.46 19.2 86 9 5 7 7 0 1 0  NAG 607 C 18 2.18 3.24 103.6 -2.07 -0.46 25.1 83 11 7 8 5 0 1 1  NAG 1 S NAG 2 S BMA 3 S MAN 4 S 19 2.17 3.24 103.6 -2.72 -0.44 33.1 82 17 5 6 4 0 1 1  NAG 1 S NAG 2 S BMA 3 S MAN 4 S 20 1.17 1.75 105.9 -1.72 -0.57 19.9 83 10 8 10 6 1 1 0   21 2.06 3.09 113.0 -1.55 -0.35 21.1 81 10 5 7 7 1 2 0   22 2.57 2.49 114.5 -1.66 -0.49 19.9 85 10 5 9 7 1 1 0  NAG 607 C 23 1.97 2.43 117.1 -1.38 -0.32 21.3 82 10 7 8 9 0 2 1  NAG 1 S NAG 2 S BMA 3 S MAN 4 S 24 1.60 1.58 122.1 -2.33 -0.47 27.2 82 18 2 4 4 0 2 0   25 1.45 1.54 123.1 -1.96 -0.49 22.9 82 14 4 6 5 0 2 0   26 1.48 1.54 133.2 -2.23 -0.45 26.1 80 17 5 7 6 0 3 0   27 2.17 3.26 137.1 -1.59 -0.34 22.3 82 10 7 10 8 1 2 1  NAG 1 S NAG 2 S BMA 3 S MAN 4 S 28 1.29 2.29 142.0 -1.07 -0.24 18.6 87 8 9 13 12 2 1 1  NAG 602 E NAG 609 E NAG 1 S NAG 2 S BMA 3 S MAN 4 S NAG 1 Y 29 1.28 2.40 142.0 -1.40 -0.35 19.4 87 11 8 14 11 2 0 0  NAG 610 A NAG 609 E NAG 1 Y 30 1.31 3.63 199.9 -1.28 -0.33 18.0 85 16 8 15 14 2 2 0  NAG 609 E NAG 1 Y Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.