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PDBsum entry 8ssl
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Tunnel analysis for: 8ssl calculated with  MOLE 2.0
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PDB id
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8ssl
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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12 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.23 |
31.0 |
-1.74 |
-0.80 |
18.9 |
86 |
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2 |
4 |
3 |
1 |
0 |
1 |
0 |
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GDP 1101 A
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2 |
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1.29 |
1.89 |
38.5 |
0.41 |
0.44 |
11.1 |
74 |
5 |
0 |
2 |
7 |
4 |
0 |
0 |
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3 |
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1.21 |
1.20 |
52.8 |
0.08 |
0.17 |
6.8 |
73 |
2 |
1 |
4 |
8 |
5 |
1 |
1 |
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4 |
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1.45 |
1.61 |
52.9 |
-1.20 |
-0.49 |
16.8 |
85 |
6 |
4 |
6 |
8 |
1 |
0 |
0 |
GDP 1101 A MG 1102 A
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5 |
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1.31 |
2.03 |
57.8 |
-0.32 |
-0.01 |
5.0 |
75 |
1 |
1 |
6 |
9 |
6 |
2 |
0 |
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6 |
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1.30 |
1.90 |
59.7 |
-0.09 |
0.06 |
6.6 |
74 |
3 |
1 |
4 |
10 |
5 |
1 |
0 |
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7 |
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1.44 |
1.62 |
61.1 |
-1.48 |
-0.63 |
16.5 |
86 |
5 |
7 |
7 |
5 |
0 |
1 |
0 |
GDP 1101 A MG 1102 A
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8 |
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1.45 |
1.66 |
19.5 |
1.66 |
0.28 |
3.0 |
81 |
1 |
0 |
3 |
8 |
0 |
0 |
0 |
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9 |
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1.14 |
1.54 |
23.5 |
1.87 |
0.39 |
3.3 |
75 |
1 |
1 |
1 |
9 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program