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PDBsum entry 8ssl

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 8ssl calculated with MOLE 2.0 PDB id
8ssl
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.21 3.92 29.9 -1.61 -0.37 24.6 84 6 2 2 3 0 0 0  
2 1.30 2.89 51.7 -1.54 -0.19 26.4 77 7 3 1 7 1 0 0  
3 1.31 2.89 81.5 -2.02 -0.35 26.6 79 10 6 3 7 1 1 0  
4 1.68 1.90 91.8 -1.49 -0.20 22.4 81 12 7 5 5 3 2 0  
5 1.27 1.46 109.3 -0.68 -0.11 17.7 83 11 9 6 16 2 2 0  
6 1.29 1.53 171.0 -1.50 -0.22 25.1 82 14 9 5 11 3 1 0  
7 1.46 1.47 196.7 -1.82 -0.24 25.0 82 19 15 8 13 4 3 0  
8 1.34 1.44 211.1 -1.04 -0.20 17.7 81 11 12 10 18 6 6 1  
9 1.34 1.35 240.4 -1.20 -0.24 20.8 82 19 13 14 18 2 2 0  
10 1.48 1.90 228.9 -2.01 -0.39 25.3 82 14 10 8 9 2 5 0  
11 1.71 1.60 226.4 -2.27 -0.41 27.7 82 13 11 5 9 1 4 0  
12 1.18 1.81 252.6 -0.71 -0.17 17.1 85 17 14 15 27 8 5 0  
13 1.32 2.62 256.9 -1.53 -0.23 24.0 81 22 14 9 16 3 2 0  
14 1.36 1.70 264.5 -0.80 -0.14 17.3 83 16 13 12 26 9 6 1  
15 1.35 2.46 301.9 -1.65 -0.31 23.2 84 25 12 12 15 8 3 0  
16 1.35 1.42 300.9 -1.77 -0.33 24.3 83 21 18 13 20 7 6 0  
17 1.23 1.41 309.9 -1.27 -0.30 18.2 83 9 16 15 19 6 7 1  
18 1.31 1.20 386.3 -1.76 -0.30 23.2 83 32 23 18 29 9 8 0  
19 1.33 1.44 408.8 -1.77 -0.33 22.8 83 22 19 16 23 7 6 0  
20 1.23 1.59 32.8 -0.27 -0.31 11.2 87 2 0 2 6 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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