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PDBsum entry 8k5a
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Pore analysis for: 8k5a calculated with  MOLE 2.0
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PDB id
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8k5a
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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18 pores,
coloured by radius |
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18 pores,
coloured by radius
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18 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.28 |
2.91 |
31.3 |
-2.91 |
-0.67 |
31.8 |
86 |
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4 |
6 |
4 |
0 |
1 |
2 |
0 |
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DG 19 I DG 20 I
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2 |
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1.27 |
1.36 |
36.2 |
-0.86 |
-0.36 |
16.8 |
82 |
4 |
3 |
1 |
5 |
0 |
0 |
1 |
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3 |
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1.14 |
1.35 |
37.1 |
-0.89 |
-0.17 |
13.1 |
74 |
4 |
1 |
1 |
5 |
1 |
1 |
1 |
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4 |
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1.65 |
2.89 |
37.9 |
-1.42 |
-0.55 |
20.3 |
86 |
5 |
6 |
4 |
2 |
0 |
0 |
1 |
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5 |
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4.55 |
5.35 |
44.0 |
-1.48 |
-0.49 |
21.9 |
85 |
7 |
1 |
3 |
5 |
1 |
2 |
0 |
DC 20 H DT 21 H DC 22 H C 11 J
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6 |
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2.32 |
2.32 |
61.6 |
-1.72 |
-0.52 |
20.5 |
81 |
7 |
4 |
5 |
5 |
1 |
2 |
0 |
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7 |
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1.84 |
2.38 |
64.2 |
-2.28 |
-0.46 |
24.7 |
81 |
6 |
10 |
7 |
4 |
6 |
2 |
0 |
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8 |
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2.55 |
2.64 |
65.4 |
-1.35 |
-0.55 |
20.2 |
87 |
8 |
4 |
4 |
6 |
1 |
2 |
0 |
DC 20 H DT 21 H DC 22 H C 11 J
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9 |
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2.93 |
2.92 |
67.7 |
-0.87 |
-0.37 |
17.1 |
84 |
5 |
1 |
2 |
6 |
0 |
1 |
0 |
DT 13 H DG 14 H DC 17 H DT 19 H DC 20 H DT 21 H
DC 22 H DA 17 I DC 18 I DG 19 I C 11 J G 12 J G
13 J A 14 J G 15 J A 16 J
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10 |
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1.26 |
1.33 |
74.8 |
0.20 |
0.08 |
16.8 |
87 |
2 |
3 |
0 |
6 |
0 |
1 |
0 |
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11 |
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1.84 |
2.34 |
79.3 |
-1.66 |
-0.32 |
21.6 |
80 |
10 |
8 |
6 |
7 |
4 |
2 |
0 |
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12 |
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2.89 |
2.88 |
85.5 |
-1.27 |
-0.51 |
18.8 |
79 |
8 |
2 |
4 |
5 |
1 |
4 |
0 |
DT 13 H DG 14 H DC 17 H DT 19 H DC 20 H DA 17 I
DC 18 I DG 19 I C 11 J G 12 J G 13 J A 14 J G 15
J A 16 J
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13 |
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1.20 |
1.34 |
89.5 |
-1.50 |
-0.36 |
23.9 |
76 |
11 |
5 |
3 |
8 |
1 |
2 |
1 |
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14 |
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1.16 |
1.27 |
91.9 |
-1.77 |
-0.47 |
22.7 |
80 |
14 |
5 |
3 |
4 |
1 |
2 |
1 |
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15 |
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1.82 |
2.38 |
95.7 |
-2.22 |
-0.48 |
25.7 |
82 |
11 |
14 |
9 |
5 |
6 |
3 |
0 |
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16 |
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2.67 |
2.65 |
100.7 |
-1.79 |
-0.37 |
19.8 |
82 |
10 |
10 |
7 |
10 |
3 |
4 |
0 |
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17 |
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1.85 |
2.34 |
122.0 |
-1.80 |
-0.47 |
20.7 |
82 |
15 |
11 |
12 |
9 |
7 |
5 |
0 |
DC 20 H DT 21 H DC 22 H C 11 J
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18 |
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1.19 |
1.26 |
142.6 |
-2.02 |
-0.48 |
22.1 |
84 |
19 |
15 |
10 |
9 |
4 |
3 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program