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PDBsum entry 8jcz

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8jcz calculated with MOLE 2.0 PDB id
8jcz
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.19 82.2 0.39 0.01 7.1 79 4 4 3 12 5 1 3  
2 1.72 1.70 91.1 -0.39 -0.41 10.6 77 5 2 2 8 2 1 4  
3 1.39 1.52 128.1 0.18 0.08 8.3 78 7 4 4 20 9 1 3  
4 1.26 1.25 44.4 -0.75 -0.29 16.4 80 4 4 3 4 1 1 0  
5 1.45 1.97 48.8 -0.21 0.08 14.2 82 5 0 1 9 0 2 0  
6 1.10 1.11 49.3 0.27 0.05 10.8 82 4 1 1 9 0 1 0  
7 1.56 2.34 53.2 -2.97 -0.47 31.6 83 8 6 6 2 3 0 0  
8 1.22 1.40 26.3 -2.02 -0.10 12.5 74 2 2 3 0 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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