PDBsum entry 8jcz Go to PDB code:  Tunnel analysis for: 8jcz calculated with MOLE 2.0 PDB id 8jcz Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.22 27.0 1.35 0.05 1.9 76 0 0 1 6 2 0 2   2 1.15 1.23 30.3 1.61 0.21 2.0 71 1 0 1 9 3 0 2   3 1.15 1.22 39.0 0.91 0.09 5.7 81 2 1 2 8 1 0 2   4 1.14 1.22 41.2 1.19 0.17 5.5 81 1 1 3 9 1 0 3   5 1.13 2.30 40.6 1.89 0.46 1.8 81 1 1 3 10 2 0 0   6 1.39 1.63 15.4 -1.37 0.04 20.7 70 1 2 0 0 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.