PDBsum entry 8ihj Go to PDB code:  Tunnel analysis for: 8ihj calculated with MOLE 2.0 PDB id 8ihj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 3.58 40.9 0.62 0.32 13.6 75 2 4 2 5 6 0 0  P9X 501 R 2 1.19 3.57 41.8 0.86 0.59 6.2 71 1 2 2 7 8 0 0  P9X 501 R 3 1.20 3.54 41.8 1.64 0.73 5.2 63 1 1 1 6 11 1 1  P9X 501 R 4 1.15 1.35 44.1 0.63 0.32 11.8 73 2 3 2 6 8 0 0  P9X 501 R 5 1.19 3.55 47.3 0.60 0.17 8.1 79 3 2 3 7 6 0 0  P9X 501 R 6 1.11 1.20 47.0 -0.38 -0.36 10.6 86 3 4 1 8 0 0 0   7 0.89 1.05 18.0 -0.43 -0.31 16.9 81 2 2 0 3 0 1 0   8 1.13 1.13 15.6 0.51 0.15 2.3 71 0 0 1 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.