 |
PDBsum entry 8ia2
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8ia2 calculated with MOLE 2.0
|
PDB id
|
|
|
|
8ia2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
18 pores,
coloured by radius |
 |
18 pores,
coloured by radius
|
18 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.59 |
2.53 |
25.5 |
-1.14 |
0.11 |
11.5 |
77 |
 |
2 |
3 |
1 |
2 |
4 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.16 |
2.42 |
28.2 |
1.78 |
0.53 |
1.3 |
78 |
0 |
0 |
3 |
7 |
2 |
0 |
0 |
|
 |
3 |
 |
1.73 |
2.92 |
33.5 |
-2.14 |
-0.39 |
23.1 |
81 |
4 |
4 |
4 |
5 |
2 |
0 |
0 |
|
 |
4 |
 |
1.19 |
1.76 |
38.0 |
0.80 |
0.17 |
7.4 |
74 |
2 |
2 |
1 |
5 |
4 |
0 |
0 |
|
 |
5 |
 |
1.19 |
1.65 |
53.7 |
0.29 |
0.06 |
6.4 |
85 |
2 |
2 |
5 |
9 |
4 |
0 |
0 |
|
 |
6 |
 |
1.20 |
1.78 |
55.5 |
0.58 |
0.24 |
6.8 |
76 |
3 |
1 |
3 |
10 |
5 |
0 |
0 |
|
 |
7 |
 |
1.22 |
1.66 |
71.2 |
0.32 |
0.16 |
5.6 |
85 |
3 |
1 |
7 |
14 |
4 |
0 |
0 |
|
 |
8 |
 |
1.24 |
1.49 |
84.5 |
-1.43 |
-0.38 |
17.7 |
89 |
10 |
6 |
10 |
6 |
4 |
1 |
0 |
|
 |
9 |
 |
1.21 |
1.37 |
91.2 |
-1.40 |
-0.36 |
17.5 |
87 |
8 |
7 |
10 |
7 |
7 |
1 |
0 |
|
 |
10 |
 |
1.40 |
1.51 |
98.4 |
-0.52 |
-0.07 |
15.6 |
88 |
8 |
4 |
5 |
11 |
3 |
0 |
1 |
|
 |
11 |
 |
1.19 |
1.37 |
106.3 |
-1.29 |
-0.29 |
13.6 |
84 |
6 |
5 |
12 |
9 |
7 |
1 |
0 |
|
 |
12 |
 |
1.18 |
2.29 |
109.2 |
-0.22 |
-0.10 |
10.6 |
87 |
9 |
4 |
10 |
11 |
6 |
1 |
0 |
|
 |
13 |
 |
1.19 |
1.47 |
110.1 |
-0.81 |
-0.13 |
11.8 |
85 |
8 |
3 |
11 |
13 |
5 |
1 |
0 |
|
 |
14 |
 |
1.39 |
1.46 |
117.3 |
-0.32 |
-0.01 |
10.6 |
85 |
5 |
2 |
10 |
13 |
4 |
0 |
1 |
|
 |
15 |
 |
1.17 |
1.37 |
127.5 |
-0.27 |
0.03 |
9.5 |
86 |
5 |
5 |
9 |
13 |
8 |
1 |
1 |
|
 |
16 |
 |
1.23 |
1.47 |
131.7 |
-0.32 |
0.01 |
9.9 |
88 |
7 |
4 |
11 |
13 |
5 |
1 |
1 |
|
 |
17 |
 |
1.20 |
1.61 |
200.1 |
0.02 |
0.06 |
8.3 |
83 |
7 |
3 |
10 |
24 |
5 |
1 |
0 |
|
 |
18 |
 |
1.75 |
1.91 |
39.5 |
-1.50 |
-0.49 |
17.9 |
83 |
8 |
3 |
5 |
1 |
1 |
2 |
2 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |