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PDBsum entry 8ia2

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 8ia2 calculated with MOLE 2.0 PDB id
8ia2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.65 28.3 0.93 0.36 1.7 86 0 0 4 9 3 0 1  
2 1.03 1.05 48.8 -0.21 -0.11 6.8 79 2 2 5 6 6 0 1  
3 1.13 1.02 72.9 -0.08 0.02 6.7 79 3 2 7 10 8 0 1  
4 1.09 1.07 76.0 -0.33 -0.19 10.0 85 6 3 7 8 6 0 1  
5 1.15 1.38 24.7 -1.46 0.06 22.8 72 5 2 1 2 3 0 1  
6 1.25 1.62 16.4 1.23 0.27 4.0 79 1 0 2 6 0 1 0  
7 1.41 1.92 15.2 0.27 0.51 15.7 70 1 3 0 5 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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