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PDBsum entry 8h0v
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Tunnel analysis for: 8h0v calculated with  MOLE 2.0
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PDB id
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8h0v
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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14 tunnels,
coloured by tunnel radius |
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14 tunnels,
coloured by
tunnel radius
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14 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.20 |
1.39 |
82.9 |
0.68 |
0.15 |
8.4 |
72 |
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3 |
3 |
2 |
15 |
4 |
2 |
0 |
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DC -89 N DA 91 T DC 92 T DC 93 T
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2 |
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1.16 |
1.91 |
96.0 |
-0.12 |
0.14 |
17.4 |
77 |
9 |
4 |
3 |
17 |
3 |
2 |
0 |
DC -90 N DC -89 N
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3 |
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1.18 |
1.28 |
101.9 |
-0.15 |
0.15 |
18.6 |
77 |
10 |
5 |
3 |
17 |
3 |
2 |
0 |
DC -90 N DC -89 N
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4 |
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1.19 |
1.78 |
107.6 |
-0.17 |
0.15 |
18.2 |
77 |
9 |
5 |
3 |
17 |
3 |
3 |
0 |
DC -90 N DC -89 N
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5 |
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1.18 |
1.89 |
111.3 |
0.10 |
-0.02 |
12.9 |
79 |
5 |
6 |
2 |
18 |
3 |
1 |
0 |
DA -
95 N G 5 P U 11 P DC 92 T DC 93 T DT 95 T DA 96 T
DA 97 T DG 98 T DC 99 T
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6 |
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1.20 |
1.49 |
119.6 |
-0.06 |
-0.05 |
15.1 |
79 |
6 |
9 |
4 |
18 |
3 |
1 |
0 |
DA -
95 N A 1 P A 2 P U 3 P A 4 P G 5 P G 6 P DC 92 T
DC 93 T DT 95 T DC 99 T DC 102 T DT 103 T DA 104
T DT 105 T DT 106 T
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7 |
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1.22 |
1.41 |
126.9 |
-0.29 |
-0.08 |
15.6 |
76 |
8 |
7 |
6 |
21 |
4 |
2 |
0 |
DA -95 N DC -
94 N G 5 P DC 92 T DC 93 T DG 94 T DT 95 T DA 96 T
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8 |
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1.22 |
1.39 |
135.6 |
-0.38 |
-0.13 |
15.3 |
77 |
11 |
6 |
5 |
21 |
3 |
3 |
0 |
DA -95 N DC -94 N DG -
93 N G 5 P DC 92 T DC 93 T DG 94 T DT 95 T DA 96 T
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9 |
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1.19 |
3.24 |
139.0 |
-0.42 |
-0.16 |
16.4 |
82 |
8 |
9 |
8 |
18 |
3 |
2 |
0 |
DA -
95 N C 0 P U 3 P A 4 P G 5 P G 6 P DC 92 T DC 93
T DT 95 T DC 99 T DC 102 T DT 103 T
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10 |
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1.18 |
2.00 |
151.1 |
-0.21 |
-0.08 |
16.9 |
80 |
11 |
9 |
3 |
22 |
3 |
2 |
0 |
DA -95 N A -2 P G -
1 P C 0 P A 1 P A 2 P U 3 P A 4 P G 5 P G 6 P DC
92 T DC 93 T DT 95 T DC 99 T DC 102 T DT 103 T DA
104 T DT 105 T
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11 |
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1.18 |
1.99 |
159.0 |
-0.32 |
-0.15 |
14.8 |
79 |
6 |
10 |
6 |
21 |
5 |
2 |
0 |
DA -111 N DA -
95 N A 1 P A 2 P U 3 P A 4 P G 5 P G 6 P DC 92 T
DC 93 T DT 95 T DC 99 T DC 102 T DT 103 T DA 104
T DT 105 T DT 106 T DC 108 T
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12 |
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1.08 |
3.41 |
16.7 |
2.47 |
0.99 |
1.0 |
76 |
0 |
0 |
1 |
7 |
1 |
0 |
0 |
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13 |
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1.16 |
1.58 |
16.5 |
0.22 |
0.45 |
22.3 |
82 |
2 |
1 |
1 |
4 |
0 |
0 |
0 |
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14 |
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1.59 |
1.64 |
17.8 |
1.25 |
0.16 |
2.4 |
88 |
0 |
1 |
0 |
6 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program