PDBsum entry 8gnh Go to PDB code:  Tunnel analysis for: 8gnh calculated with MOLE 2.0 PDB id 8gnh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.14 25.6 0.50 0.12 7.5 76 0 1 1 5 4 1 0   2 1.11 1.11 27.5 0.74 0.11 6.5 78 0 1 2 5 4 0 0   3 1.43 1.58 31.9 -0.30 0.16 7.7 75 1 1 3 5 5 1 0   4 1.36 3.06 32.7 -0.06 0.08 7.4 78 1 1 3 4 5 0 0   5 1.29 1.63 44.2 0.14 0.29 10.9 73 2 3 3 7 7 1 0   6 1.29 1.61 45.0 0.36 0.22 9.7 74 2 3 3 6 7 0 0   7 1.24 1.72 17.3 0.38 0.28 9.4 85 1 1 0 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.