PDBsum entry 8gcc Go to PDB code:  Pore analysis for: 8gcc calculated with MOLE 2.0 PDB id 8gcc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.83 2.80 28.9 -0.84 0.24 22.2 71 4 2 0 3 5 1 0   2 1.25 1.60 32.0 -0.70 0.04 21.8 76 4 3 2 3 3 0 1   3 2.90 2.90 32.2 -1.85 -0.68 22.9 77 3 2 0 0 0 0 0  DT 15 C DC 16 C DA 17 C DT 19 C DT 21 C DT 22 C DG 2 D DT 4 D DA 5 D DA 6 D 4 2.64 2.64 34.1 -1.62 -0.74 20.2 75 3 1 0 0 0 0 0  DT 15 C DC 16 C DA 17 C DT 19 C DT 21 C DG 2 D DA 3 D DT 4 D DA 5 D DA 6 D 5 1.25 2.23 51.1 -0.84 -0.13 19.7 74 5 3 2 3 3 0 1  DC 14 C DT 15 C 6 2.26 3.67 53.4 -1.60 -0.45 21.8 81 7 6 3 5 3 0 0   7 1.48 1.49 62.8 -1.91 -0.38 23.3 78 8 4 3 5 3 1 0  DA 12 C DG 13 C DC 14 C DT 15 C DA 6 D DA 12 D 8 2.34 2.69 71.0 -1.69 -0.71 14.3 86 5 7 7 5 1 0 0  DA 12 C DG 13 C DC 14 C DT 15 C DA 6 D DA 12 D DG 13 D DC 14 D 9 2.70 2.96 94.7 -2.00 -0.32 28.2 79 13 9 4 6 5 0 0   10 2.46 2.62 113.3 -2.08 -0.59 19.6 85 9 5 8 5 1 0 0  DA 12 C DG 13 C DC 14 C DT 15 C DA 6 D DA 12 D DG 13 D DC 14 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.