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PDBsum entry 8g6h

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 8g6h calculated with MOLE 2.0 PDB id
8g6h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 2.29 101.0 -0.81 -0.16 20.2 82 14 5 2 15 2 0 0  DA -35 I DG -45 J
2 1.26 2.20 106.6 -0.79 -0.20 17.5 81 13 3 3 15 3 1 0  DA 29 I DC -25 J

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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