PDBsum entry 8fye

Pore analysis for: 8fye calculated with

MOLE 2.0

PDB id

8fye

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

5 pores, coloured by radius

7 pores, coloured by radius

7 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

3.25

5.07

29.7

-1.30

-0.55

13.6

83

1

4

5

2

2

1

0

2

2.26

2.26

30.5

-0.71

-0.44

14.1

80

5

2

2

3

0

2

0

3

2.26

2.26

34.4

-1.46

-0.64

16.6

88

4

4

5

2

1

1

0

4

1.71

2.35

35.3

-1.29

-0.61

13.9

87

2

4

4

2

1

1

0

5

2.34

2.44

36.2

-0.81

-0.47

11.7

82

4

1

4

3

1

2

3

6

2.08

2.72

31.3

-0.18

-0.07

3.9

79

0

1

3

6

2

0

0

Y01 503 R

7

2.27

2.40

32.4

-1.42

-0.42

20.1

84

5

2

3

1

0

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.