PDBsum entry 8fye Go to PDB code:  Tunnel analysis for: 8fye calculated with MOLE 2.0 PDB id 8fye Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.70 1.98 24.6 -0.43 -0.01 15.4 83 4 1 1 4 1 0 0  J40 502 R 2 1.71 1.83 26.1 -1.17 -0.34 19.4 94 1 5 6 4 0 0 0   3 1.77 1.76 29.7 -0.06 0.10 13.1 81 1 3 1 5 2 0 1  YGH 501 R 4 1.32 1.40 30.3 -0.23 0.00 6.0 84 0 1 2 6 3 0 1  YGH 501 R Y01 503 R 5 1.76 1.76 30.8 0.11 0.02 8.1 83 1 2 1 6 3 0 1  YGH 501 R 6 1.60 2.67 18.2 -1.80 -0.31 28.6 85 3 3 1 2 0 0 0   7 1.61 2.65 19.6 -1.75 -0.33 27.8 84 4 3 1 2 0 0 0   8 1.62 2.65 24.6 -1.20 -0.22 23.8 81 5 2 3 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.