PDBsum entry 8eqc

Pore analysis for: 8eqc calculated with

MOLE 2.0

PDB id

8eqc

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

14 pores, coloured by radius

14 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

3.75

3.75

25.2

-1.13

-0.62

12.8

82

3

2

1

1

0

3

0

2

3.49

5.14

25.8

-2.31

-0.63

32.1

84

4

3

2

2

0

1

0

3

2.49

2.49

28.2

-0.62

-0.29

10.0

75

2

2

1

3

0

4

0

4

3.33

3.66

29.4

-2.07

-0.79

20.0

78

3

4

2

0

0

1

0

5

3.73

4.76

40.7

-1.38

-0.51

16.0

82

4

2

1

3

0

3

0

6

3.74

3.74

42.6

-1.51

-0.64

11.6

81

2

2

2

2

0

4

0

7

2.57

2.88

47.3

-1.01

-0.26

16.5

80

5

2

1

5

0

3

0

8

2.58

2.88

49.2

-1.20

-0.40

12.7

79

3

2

2

4

0

4

0

9

3.32

3.67

50.4

-2.48

-0.78

24.9

81

6

4

3

1

0

2

0

10

3.14

3.60

56.6

-1.35

-0.43

15.0

80

5

4

5

4

0

4

0

11

3.34

3.69

60.1

-2.14

-0.69

23.9

81

6

7

2

2

0

3

0

12

2.57

2.88

66.7

-1.82

-0.52

22.8

80

7

7

2

4

0

3

0

13

1.42

2.07

83.8

-2.12

-0.56

16.8

81

4

2

4

1

4

0

0

14

1.44

2.02

89.4

-1.89

-0.52

14.4

77

4

2

4

2

4

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.