PDBsum entry 8ed9 Go to PDB code:  Tunnel analysis for: 8ed9 calculated with MOLE 2.0 PDB id 8ed9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.08 1.36 16.0 1.05 0.34 15.7 87 2 1 0 6 0 0 0   2 1.23 3.59 25.8 2.15 0.66 0.9 101 0 0 4 11 0 0 0   3 1.23 1.23 19.9 2.56 0.95 4.4 88 2 0 0 10 2 0 0   4 1.12 1.32 19.9 2.05 0.83 1.3 64 0 0 0 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.