PDBsum entry 8ebc Go to PDB code:  Tunnel analysis for: 8ebc calculated with MOLE 2.0 PDB id 8ebc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.49 33.5 -0.47 -0.54 5.8 93 1 1 3 5 0 0 0  IMP 401 E 2 1.30 1.49 43.8 -1.15 -0.25 15.0 84 3 4 5 6 2 0 0  IMP 401 E 3 1.30 1.49 46.3 -1.19 -0.57 15.4 87 2 6 2 6 0 0 0  IMP 401 E 4 1.32 1.49 56.0 -1.26 -0.27 15.8 84 5 6 5 6 3 0 0  IMP 401 E 5 1.03 2.94 18.3 1.46 0.32 8.2 91 1 2 1 6 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.