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PDBsum entry 8dfc

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8dfc calculated with MOLE 2.0 PDB id
8dfc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.20 53.2 -0.75 -0.12 13.4 81 5 2 4 5 5 0 1  ICS 600 C HCA 601 C
2 1.14 3.35 44.7 0.05 0.09 12.0 77 2 3 3 8 3 2 0  
3 1.30 1.42 40.7 -0.45 -0.26 7.8 74 2 1 7 0 3 2 5  CLF 600 B
4 1.15 1.45 20.4 -1.93 -0.14 24.0 77 4 3 2 1 2 0 0  
5 1.27 1.83 16.6 2.32 0.63 3.1 86 0 1 1 7 1 0 0  
6 1.11 1.65 17.4 0.04 0.21 5.8 89 0 1 3 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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