PDBsum entry 8cod Go to PDB code:  Pore analysis for: 8cod calculated with MOLE 2.0 PDB id 8cod Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.23 30.2 -0.70 -0.09 15.9 75 3 3 0 3 3 0 0   2 1.67 2.00 35.5 -0.58 0.05 18.0 83 6 4 2 8 2 1 0   3 1.39 1.77 41.3 -0.61 0.16 17.3 82 7 3 1 9 2 1 0   4 1.48 1.47 41.9 -1.99 -0.48 19.6 85 5 0 4 2 1 0 0   5 2.09 2.09 43.6 -1.05 0.07 14.7 71 5 1 2 4 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.