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PDBsum entry 8c4c

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8c4c calculated with MOLE 2.0 PDB id
8c4c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.65 2.10 16.1 1.13 0.31 1.6 84 0 0 2 5 1 0 0  
2 1.53 1.68 15.1 0.81 0.31 1.8 78 0 0 1 5 2 0 0  
3 1.33 1.33 16.5 -1.22 -0.69 17.9 87 1 2 3 2 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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